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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc04g051360.2.1 |
Common Name | LOC101263697 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 304aa MW: 33804.1 Da PI: 7.0166 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc04g051360.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66 | 7.4e-21 | 136 | 185 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa+a+++a++ ++g
Solyc04g051360.2.1 136 RYRGVRQRP-WGKWAAEIRDPY----KaARVWLGTFDTAEGAARAYDEAALTFRG 185
7********.**********76....35***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MCNIVHYKVA NSNDNRSSRQ DDEGINVFNT MFQGNINREE EMSVMVSALT RVVVGNHPSE 60 NIENHHQNNT LISRGVGEKR GRDEVLLHGT NSSHMILSSG GEGSSIRTTR EATFIYTNST 120 NNSIIDESVN NQVRRRYRGV RQRPWGKWAA EIRDPYKAAR VWLGTFDTAE GAARAYDEAA 180 LTFRGSKAKL NFPENVTLLV PSSIQQPIYS SPDPAISPYR SNFIIGHTST EVEPILHTNP 240 SNFIEPIAHT SSLYRSNFIE RNHHMVQQEP YFQAGSTSGG SDFHQTTNSS NSSIYDHPSS 300 SSG*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT990489 | 0.0 | S.lycopersicum DNA sequence from clone LE_HBa-20F17 on chromosome 4, complete sequence |