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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc04g050750.1.1 |
Common Name | LOC101260337 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 162aa MW: 17949 Da PI: 5.3838 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc04g050750.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.6 | 3.5e-19 | 37 | 86 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr++ +g+WvAeIr+p ng +r++lg+f t eAa+a++ a+++l+g
Solyc04g050750.1.1 37 TYRGVRQRT-WGKWVAEIREP--NG-GARIWLGTFNTSVEAARAYDDAARRLYG 86
69****999.**********9..33.5************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 162 aa
Download sequence Send
to blast |
MEECGKSRIE SVESKRKSRS RKGCMRGKGG PENASCTYRG VRQRTWGKWV AEIREPNGGA 60 RIWLGTFNTS VEAARAYDDA ARRLYGSDAK LNLSEQESTD VGIIEDGDGE CSVLEEASIF 120 KDGNGKYLVW DTPAPSLLGV DFHGDATTCF NWKNQTEMMY F*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CU915740 | 0.0 | S.lycopersicum DNA sequence from clone LE_HBa-103J9, complete sequence |