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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc04g050010.1.1 |
Common Name | LOC101248668 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
LBD |
Protein Properties |
Length: 166aa MW: 18812.5 Da PI: 5.5755 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc04g050010.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 136.6 | 9.2e-43 | 13 | 112 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++reda++s+vyeA+ar+rdPvyG++++i +lq+q+++l+
Solyc04g050010.1.1 13 PCAACKILRRRCVEKCVLAPYFPPTHPLKFTIAHRVFGASNIIKMLQELPEDQREDAVNSMVYEANARIRDPVYGCAAIICQLQKQISELQ 103
7****************************************************************************************** PP
DUF260 92 aelallkee 100
a+l++++ e
Solyc04g050010.1.1 104 ADLVKAQVE 112
***999865 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 166 aa
Download sequence Send
to blast |
MEDTSEYSCP HHPCAACKIL RRRCVEKCVL APYFPPTHPL KFTIAHRVFG ASNIIKMLQE 60 LPEDQREDAV NSMVYEANAR IRDPVYGCAA IICQLQKQIS ELQADLVKAQ VEIMNVQIQN 120 TNLVALICTE MTQNQENNDH QQAYGNSNTC LEDNNLYAPW KSLWT*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |