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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc04g015570.2.1 |
Common Name | LOC101247205 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
C2H2 |
Protein Properties |
Length: 278aa MW: 31404.9 Da PI: 8.3814 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc04g015570.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11 | 0.0013 | 216 | 238 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp C+ +Fs+ L H ++ H
Solyc04g015570.2.1 216 PCPQCHLRFSTVRALIDHVQKvH 238
5*****************99988 PP
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2 | zf-C2H2 | 15.4 | 5.2e-05 | 250 | 272 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp C+k F+++ L+ H + H
Solyc04g015570.2.1 250 VCPRCSKGFRDPVALVEHVEReH 272
7*****************99888 PP
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Protein Features
? help Back to Top |
 |
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
SuperFamily | SSF118310 | 1.18E-10 | 4 | 59 | No hit | No description |
Gene3D | G3DSA:4.10.1110.10 | 3.2E-9 | 10 | 53 | IPR000058 | Zinc finger, AN1-type |
PROSITE profile | PS51039 | 7.376 | 10 | 55 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00154 | 0.0062 | 13 | 52 | IPR000058 | Zinc finger, AN1-type |
Pfam | PF01428 | 6.4E-12 | 13 | 51 | IPR000058 | Zinc finger, AN1-type |
Gene3D | G3DSA:4.10.1110.10 | 3.1E-10 | 90 | 149 | IPR000058 | Zinc finger, AN1-type |
SuperFamily | SSF118310 | 4.91E-9 | 93 | 149 | No hit | No description |
PROSITE profile | PS51039 | 7.872 | 98 | 145 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00154 | 0.02 | 101 | 142 | IPR000058 | Zinc finger, AN1-type |
Pfam | PF01428 | 8.7E-8 | 101 | 141 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00355 | 0.036 | 215 | 238 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13894 | 0.001 | 216 | 238 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 217 | 238 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 8.974 | 249 | 277 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 7.1 | 249 | 272 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 251 | 272 | IPR007087 | Zinc finger, C2H2 |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MGTPEFPNLG KHCSVEDCRQ IDFLPFTCDC CFKVYCLDHR SYIRHQCPTA NKNNVTVVIC 60 PLCAKGVRLN PVEDPNITWE SHVNTECDPS NYEKATKKKK CPVPRCKELL TFSNTIKCRD 120 CTIDHCLKHR FGPDHSCAGP KKPEATFQFM NFLNGSKEDS KKAQPTTTSR WTTSLLKVVS 180 SVKEKFNNEF NQPQQMGQSS RATNHSVTNN SSQVEPCPQC HLRFSTVRAL IDHVQKVHEK 240 NGVMNMTIDV CPRCSKGFRD PVALVEHVER EHKGSSM*
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Functional Description ? help
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Source |
Description |
UniProt | May be involved in environmental stress response. {ECO:0000250}. |