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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc03g119800.1.1 |
Common Name | LOC101264812 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 341aa MW: 37390.5 Da PI: 5.0502 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g119800.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.8 | 6.2e-19 | 24 | 75 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
+++ GVr+++ +grWvAeI+d ++ r +lg+f+tae+Aa+a+++a++ l+g+
Solyc03g119800.1.1 24 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 75
6799******.7*********....4456*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MKPPPPQPND GIRTRRKPSS RGHPRFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED 60 AARAYDQAAR TLRGANARTN FELPASDSQQ GSSIVENSEP FNFEEACRTE EPENSLVGAL 120 KAKLFNSKNS RSFIQAYASN SSSELASKVK PSVPCSEIKK TSTQSEKLPK IGHVKNCSDY 180 LFRGNHNLDY ISLMTNDYQP MISSSQCQDN QLYSGTDSAI MWLNEQGTLP WGEPQMSQVQ 240 DEVSFDTTIN INNNINTNIF GGGNSTTATC TWPVSVSEPT VDLSAFGGID VLNGSIMMPD 300 MNGLTHTSSV TTEQQFLQFE NGLWGVGDSA GWDPFLLSSV *
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