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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc03g118160.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
LFY |
Protein Properties |
Length: 430aa MW: 47990.9 Da PI: 6.9528 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g118160.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 619.4 | 6.4e-189 | 1 | 411 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseap.............leaaaaaaarklreleelfkayGvryltvakiaelGftvstL 78
mdp+afsaslfkwdpr a+ +pp+rlle a +++p +++ + ++r+l +leelf+ayG+ry+t+akiaelGftv+tL
Solyc03g118160.1.1 1 MDPDAFSASLFKWDPRGAM-PPPSRLLEPVAPPQPPpslppppppqplpTSSYSIRSTRELGGLEELFQAYGIRYYTAAKIAELGFTVNTL 90
9**************9887.666677666665555456666665554434444444455566***************************** PP
FLO_LFY 79 vdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglg 169
+dmkdeeldd+m+sls+ifr+dllvGeryGikaa+rae rrleeee +++r ++ls+ +++ldalsqeglseepvq+++e+ ++g +g g
Solyc03g118160.1.1 91 LDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAIRAEWRRLEEEE-ARRRGHILSDGGTNVLDALSQEGLSEEPVQQQHEREAAGSGGGG 180
********************************************88.88888999999999****************97776555556666 PP
FLO_LFY 170 eaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCr 260
++e++a +++++++k+ + +++r +++e ++e+ ee+ee+ ++ g+g + +erqrehPfivtepgevargkknGLDYLf+LyeqCr
Solyc03g118160.1.1 181 TWEVAAGGGGRMKQRRRKK-AGRERRGEEDE--ETEELGEEDEENMNQGGGGGGISERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCR 268
9999999875555554444.23455444444..33444444455555556666667*********************************** PP
FLO_LFY 261 efLlqvqkiakerGekcPtk.................vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvG 334
+fL+qvq+iakerGekcPtk vtnqvfryakkagasyinkPkmrhYvhCYalhcLde+asnalrrafkergenvG
Solyc03g118160.1.1 269 DFLIQVQTIAKERGEKCPTKrtsligsksnhylsynyVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNALRRAFKERGENVG 359
*******************9888888888888888889***************************************************** PP
FLO_LFY 335 awrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
awrqacykplvaiaarqgwdida+fnahprL+iWYvPtkLrqLCh ers+a+
Solyc03g118160.1.1 360 AWRQACYKPLVAIAARQGWDIDAIFNAHPRLAIWYVPTKLRQLCHSERSNAA 411
*************************************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MDPDAFSASL FKWDPRGAMP PPSRLLEPVA PPQPPPSLPP PPPPQPLPTS SYSIRSTREL 60 GGLEELFQAY GIRYYTAAKI AELGFTVNTL LDMKDEELDD MMNSLSQIFR WDLLVGERYG 120 IKAAIRAEWR RLEEEEARRR GHILSDGGTN VLDALSQEGL SEEPVQQQHE REAAGSGGGG 180 TWEVAAGGGG RMKQRRRKKA GRERRGEEDE ETEELGEEDE ENMNQGGGGG GISERQREHP 240 FIVTEPGEVA RGKKNGLDYL FHLYEQCRDF LIQVQTIAKE RGEKCPTKRT SLIGSKSNHY 300 LSYNYVTNQV FRYAKKAGAS YINKPKMRHY VHCYALHCLD EDASNALRRA FKERGENVGA 360 WRQACYKPLV AIAARQGWDI DAIFNAHPRL AIWYVPTKLR QLCHSERSNA AAAASSSVSG 420 GVADHLPHF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in floral meristems and in indeterminate vegetative meristems. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that act to specify determinacy in the progenitor cells for both flowers and leaves. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF197934 | 0.0 | Lycopersicon esculentum FLORICAULA/LEAFY-like protein (FALSIFLORA) mRNA, complete cds |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-137 | floral meristem identity control protein LEAFY (LFY) |