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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc03g114720.2.1 |
| Common Name | LOC101263596 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
bHLH |
| Protein Properties |
Length: 557aa MW: 60848.4 Da PI: 8.5989 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc03g114720.2.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 51.7 | 1.6e-16 | 259 | 308 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r +h++ E+rRR++iN++f+ Lr ++P++ ++K +Ka+ L +++eYI+ Lq
Solyc03g114720.2.1 259 RSKHSATEQRRRSKINDRFQMLRGIIPNS----DQKRDKASFLLEVIEYIHFLQ 308
889*************************9....9******************99 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:1902448 | Biological Process | positive regulation of shade avoidance |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 557 aa
Download sequence Send
to blast |
MELPQPRPFG TEGRKTTHDF LSLYSPVQQD PRPPQGGYLK THDFLQPLEQ AEKTLREEET 60
NVEVATVEKP PPPVAATPSG EHILPGGIGT FSISYLHQRI PKPEASLFSV AQASSTDRND 120
ENSNCSSFTG SGFTLWDESA VKKGKTGKEN SGGDRHVLRE GGVNTGGVQP TTSLEWQSQS 180
SSNHKHNTTA LSSLSSAHQS SPLKSQSFLH MITSAKSAQD DDDDDEDFVI KKEPQSHLRG 240
SLSVKVDGKG NDQKPSTPRS KHSATEQRRR SKINDRFQML RGIIPNSDQK RDKASFLLEV 300
IEYIHFLQEK VHKYEESYQG WDNEPPKLPL SKCHRTTHGV SNLPQRIINA SSASLTYAGK 360
FDESIMGISS ANPINVQKLE PNISSTGLKD KGQQPGLTNK PTTVPMHPNT FSFSGTSSTA 420
ALYSSKLIAD TDKLESKSHS QFSLSRSHMT DYAIPNANPE RLELPIESGT ISISSAYSQG 480
LLNTLTQALH SSGVDLTQAN ISVQIDLGKR ANGRVNSSAS TVKGDNVSTS NQPIPKSRVT 540
TTREEPDHAF KRRKTS*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots. {ECO:0000269|PubMed:12679534}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
