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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc03g114440.1.1 |
Common Name | LOC101245636 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 180aa MW: 20349 Da PI: 9.8698 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g114440.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.8 | 4.2e-16 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+ s ++ r +lg+f+ aeeAa a++ a++ l+g
Solyc03g114440.1.1 32 RFIGVRQRP-SGRWVAEIKQTS---QKLRLWLGTFDKAEEAAMAYDSAARLLRG 81
689******.7******99932...36***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 180 aa
Download sequence Send
to blast |
MENSQSPSKS LNNSSKNIQQ KINPISSNDG KRFIGVRQRP SGRWVAEIKQ TSQKLRLWLG 60 TFDKAEEAAM AYDSAARLLR GKNAKTNFNN HGIFKPNEEN YSLLEKNPRL YQLMKHAIMK 120 KFAGKYQNNE CLETEEVVLV EESINKEEIC AIQLQGSSKV YSSVIVAPSF SNNEKSYQL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC215360 | 6e-14 | Solanum lycopersicum chromosome 2 clone C02HBa0025N15, complete sequence |
GenBank | AC215414 | 6e-14 | Solanum lycopersicum chromosome 2 clone C02HBa0190N21, complete sequence |
GenBank | AC215433 | 6e-14 | Solanum lycopersicum chromosome 2 clone C02HBa0280E02, complete sequence |