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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Solyc03g095770.2.1 |
| Common Name | LOC101256570 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
WRKY |
| Protein Properties |
Length: 274aa MW: 31533.2 Da PI: 6.4226 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc03g095770.2.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 69.9 | 3.7e-22 | 115 | 177 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE.EEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv.veitYegeHnhe 59
++Dg++WrKYGqK++ +s++pr YYrCt++ +C+++k+v+ +e+p + ++tY g+H+++
Solyc03g095770.2.1 115 MNDGCAWRKYGQKKILNSKYPRCYYRCTHKydqECRATKQVQIIQENPIImYHTTYFGNHTCN 177
58***************************99999***********99975168********97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
| GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
| GO:0010200 | Biological Process | response to chitin |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MEDFLGENPH NRLIKELVEG KSFTVQLQTL LKQPNESVLA EELIRKIWGS FTQAITVLNS 60
LGNSDNSLTQ GQIEEVDQPN SGSELKKKKK EKQDRRGCYK RRKTSGSWMR ESATMNDGCA 120
WRKYGQKKIL NSKYPRCYYR CTHKYDQECR ATKQVQIIQE NPIIMYHTTY FGNHTCNPTK 180
IPKHTYNNHA MVKHSDSTVL KEEEEEEESK GQSDNASSIV DSNLWQDFMP SSPSAHDSTM 240
AANYNSSYYE EIISSHDMED WAKFGEIEAI EFC*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 85 | 102 | KKKKKEKQDRRGCYKRRK |
| 2 | 87 | 102 | KKKEKQDRRGCYKRRK |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Les.9084 | 0.0 | callus| cell culture| flower| fruit| leaf| root |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
