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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Solyc03g093610.1.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
ERF |
| Protein Properties |
Length: 243aa MW: 26760.4 Da PI: 8.0388 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc03g093610.1.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.2 | 1.1e-19 | 106 | 156 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp +ng +r++lg++ +aeeAa a+++a+ +++g
Solyc03g093610.1.1 106 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYESAEEAALAYDKAAFRMRG 156
7********.***********9987..*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001944 | Biological Process | vasculature development |
| GO:0010200 | Biological Process | response to chitin |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0051301 | Biological Process | cell division |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MYQLPTSTEL TFFPAEFPVY CRSSSFSSLM PCLTESWGDL PLKVNDSEDM VIYGFLQDAF 60
SIGWTPSNLT SEEVKLEPRE EIEPAMSTSV SPPTVAPAAL QPKGRHYRGV RQRPWGKFAA 120
EIRDPAKNGA RVWLGTYESA EEAALAYDKA AFRMRGTKAL LNFPHRIGLN EPEPVRVTVK 180
RRLSESASSS VSSASESGSP KRRRKGVAAK QAELEVESRG PNVMKVGCQM EQFPVGEQLL 240
VS*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Present in stems. {ECO:0000269|PubMed:12935902}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the regulation of gene expression during fruit ripening, by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Probably acts as a transcriptional activator and may be involved in disease resistance pathways (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strong induction by ethylene and by wounding. {ECO:0000269|PubMed:12935902}. |
