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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc03g082430.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
GRF |
Protein Properties |
Length: 459aa MW: 50424.7 Da PI: 6.416 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g082430.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 72.7 | 4.3e-23 | 117 | 159 | 2 | 44 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
epgrC+RtDGKkWRCsr+v + +k+CErH+hrgr rsrk++e
Solyc03g082430.1.1 117 LEPGRCKRTDGKKWRCSRDVAPHQKYCERHMHRGRPRSRKHVE 159
69***************************************98 PP
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2 | QLQ | 51 | 4.4e-18 | 59 | 93 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
+FT+aQ+ +L++Q+++yKy+++ + vPp+Ll+ i+
Solyc03g082430.1.1 59 PFTWAQWKELERQAMIYKYMVSAMSVPPDLLLSIS 93
9******************************9996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MGHHQDVHCS DGGANKMLCS TDEASLLPPP PSAPVVRSLQ PFDVATNSQG GMTTTLGYPF 60 TWAQWKELER QAMIYKYMVS AMSVPPDLLL SISSEASHTT SATGSVQGRY TTNIRDLEPG 120 RCKRTDGKKW RCSRDVAPHQ KYCERHMHRG RPRSRKHVEV HAGVSNASDN KKTRLQAESI 180 PTTTASQINN RSTKQPLRST FQQIQNPLSF HDDKIGGNGI ISDSSFNELH RSSGWMMEGE 240 LVAKADSGHQ WQHLMDSNAG YSAHGYREEA LNFLVSRDME RTEHTGEFNF MTNPEFVKDT 300 SRDLINGWSN DNVYNNSNNE NLEASLWPSL GDISSSSLAL SIAMAAGDVL DEDMGLDSRF 360 MNTNQHKFWE NSFPFASGGP LAEVLHPSSS FSLGDNPTSS YTSNGDSISP AATTVSSPSG 420 VLQKTMFSHS DGSVCNSPIL AAPSNNITPE TVQFQWLR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP010940 | 1e-142 | Solanum lycopersicum DNA, chromosome 8, clone: C08HBa0195L01, complete sequence |