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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc03g034130.2.1 |
Common Name | LOC101251158 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
HD-ZIP |
Protein Properties |
Length: 225aa MW: 26776.2 Da PI: 6.0056 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g034130.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 62.4 | 6.9e-20 | 61 | 116 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
rkR +++eq++ Le+ F ++++ +e++++LA+++gL+ qV vWFqNrRa++k+
Solyc03g034130.2.1 61 RKRKLLSEEQVNLLERSFGDQHKLETERKAKLASEVGLDPHQVAVWFQNRRARWKN 116
89****************************************************95 PP
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2 | HD-ZIP_I/II | 107.5 | 1e-34 | 62 | 152 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
k++ ls+eqv+lLE+sF ++kLe+erK++la+e+gl+p+qvavWFqnrRAR+k+++lE++y++Lk++++ e++rLe+ev +++e+l
Solyc03g034130.2.1 62 KRKLLSEEQVNLLERSFGDQHKLETERKAKLASEVGLDPHQVAVWFQNRRARWKNRKLEEEYSKLKTQHEDTIIEKCRLETEVLKMKEQLC 152
66778**********************************************************************************9986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MEKGLSMKGN KVDDQMELIS HFYPQIYSQL AQQQEETVKP RRRRRKNKDE GRDNTSEVLM 60 RKRKLLSEEQ VNLLERSFGD QHKLETERKA KLASEVGLDP HQVAVWFQNR RARWKNRKLE 120 EEYSKLKTQH EDTIIEKCRL ETEVLKMKEQ LCEAKKEIER LLLEHKSDIS SNNSPTSSIF 180 SMEQSHFNLG EFGMEEQLMD DNMFFVADYQ SNYVTLWDNE LEWI*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 43 | 63 | RRKNKDEGRDNTSEVLMRKRK |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:16055682}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682}. |