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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc03g007460.1.1 |
Common Name | LOC101254274 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 397aa MW: 43452.1 Da PI: 4.3107 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g007460.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.4 | 2.1e-19 | 128 | 177 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ kl+g
Solyc03g007460.1.1 128 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 177
89*******.**********82....35*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MDYHSLCPIK YTEHRNVIRK VTKPSLVKSK KLSEAAKSSQ LNPSVPRTVR ISVTDPDATD 60 SSSDEEDLLF GRRRVKKYIN EISIETAVKC EVSSGNGKTV NKRAPEPLQT KQKPMKVQPP 120 PSAGAARKFR GVRQRPWGKW AAEIRDPARR VRLWLGTYDT AEEAAMVYDN AAIKLRGPDA 180 LTNFSTPAKA EPEPEPEPEP EISALSHSGY ESGNESRNIP SPTSVLRCTM SQSESGSGQV 240 HVSEECPSVQ GSMECEQTVQ PFVQCAAEPL IPSAIPQDVE ECQGETSMIP DYSSDYLPTD 300 IPFLNDFFNF DGSAAEQTLL EDSTMTAVTS TTTTTTPNEF GDLCNDSLDF GNDFLFNDAD 360 FAEFGSFDDL GDLGMDDFSQ DNSVVDYSSV DSLLAI*
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