|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc03g005990.2.1 |
Common Name | LOC101246895 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
BES1 |
Protein Properties |
Length: 324aa MW: 34696.6 Da PI: 8.1335 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g005990.2.1 | genome | ITAG | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 207.7 | 3.1e-64 | 2 | 145 | 1 | 148 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91
++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGtty+kg+kp + +++g sas+sp+
Solyc03g005990.2.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYKKGCKPVGHVDIIGYSASVSPC 92
5899*************************************************************************************** PP
DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
ss+q +sp +sy++sp+sssfpsp+s++ + + ++ ++l+p+l++ls+ ss
Solyc03g005990.2.1 93 SSYQ--------PSPGASYNPSPASSSFPSPVSSNYVANVQNnhdpNTLIPWLKNLSSGSS 145
****........9******************999987665555888*********998443 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG 60 WIVEEDGTTY KKGCKPVGHV DIIGYSASVS PCSSYQPSPG ASYNPSPASS SFPSPVSSNY 120 VANVQNNHDP NTLIPWLKNL SSGSSPSSSR FPHHLYIPGS SISAPVTPPL SSPTARTPRM 180 SDDPMANSGW AQQHYAFLPS STPASPGRQT PPDSGWLSGV QTPQDGPSSP TFSLVSPNPF 240 GFKEPISNGG SRMWTPGQSG ACSPAIASGI DQTADVPMSD AISAEFAFGS HMMGLVKPWE 300 GERIHEECAT DDLELTLGNS STR*
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |