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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Solyc02g084680.2.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
SRS |
| Protein Properties |
Length: 353aa MW: 37882.8 Da PI: 7.0695 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc02g084680.2.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 223.3 | 4.9e-69 | 122 | 284 | 3 | 155 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.............aeaaskrkrelks 80
g++sCqdCGnqakkdC h+RCRtCCksrgf+C+thv+stWvpaakrrerqqql+++++++++++ +++++kr+re
Solyc02g084680.2.1 122 GGGISCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVRSTWVPAAKRRERQQQLSTLQQQQEEEEqqqqqqqqqtlqlHRDNPKRPRE--D 210
5789***************************************************999988877744444444444444444444444..3 PP
DUF702 81 kkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155
++s+l +t++ ++ ++ le+ ++P++v s+avf+cvr+ssvdd+++++aYqtav+igGhvfkGiLydqG++++
Solyc02g084680.2.1 211 PSASSLVCTRILPSS-TSGLEVGNFPAKVTSNAVFHCVRMSSVDDADDQFAYQTAVNIGGHVFKGILYDQGPDNQ 284
566777778776654.55899999************************************************985 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MAALQRVMAG FFSLGGGAAA TTSQDQQQET TNNPESNWFL YRNDHHQELP TTYRGFELWQ 60
NTNSQPQIRN PINPLQDLYP TAAVGLGIGP SHSGFPSMAR PNHDPPSGGG GGSGLVMMRS 120
GGGGISCQDC GNQAKKDCPH MRCRTCCKSR GFQCQTHVRS TWVPAAKRRE RQQQLSTLQQ 180
QQEEEEQQQQ QQQQQTLQLH RDNPKRPRED PSASSLVCTR ILPSSTSGLE VGNFPAKVTS 240
NAVFHCVRMS SVDDADDQFA YQTAVNIGGH VFKGILYDQG PDNQYMGGGE SSSGGGSASH 300
QHNLIGAAGT ATSAATSGGA APEASPYLDP SLYPAPLNTF MAGTQFFPPP RS*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CU928192 | 1e-07 | S.lycopersicum DNA sequence from clone LE_HBa-142A5, complete sequence |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G51060.1 | 5e-74 | Lateral root primordium (LRP) protein-related |
