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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g078620.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
Dof |
Protein Properties |
Length: 285aa MW: 32262.8 Da PI: 6.4163 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g078620.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 110.6 | 7.3e-35 | 40 | 96 | 3 | 59 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
+++lkcprCds ntkfCyynny+ sqPr++Ck+C+r+Wt+GG+lrnvPvGggr++++
Solyc02g078620.1.1 40 SESLKCPRCDSINTKFCYYNNYNKSQPRHYCKGCKRHWTEGGTLRNVPVGGGRKNKR 96
6789***********************************************976665 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MGLSTKLVSI DDDGLDNWTT TTHNTRPEPP SIRRQLPSKS ESLKCPRCDS INTKFCYYNN 60 YNKSQPRHYC KGCKRHWTEG GTLRNVPVGG GRKNKRVRPT DPVDHINGRK HVRLEVNDQR 120 CPLITTTSMT NSIITSSILP SVTLIRGNST ITSAIDEDIK NLTSSSLPYD IFSNISQDHG 180 NTHFSLIPNS STNTQLSSNV YYNYEHMGKF DSTILEESTI TTIMPITSNN DLHSYEPWKV 240 PETSNNDLII DENMSNNYWN WNEFETLSNA ADLNISWDDL EIKP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC232770 | 0.0 | Solanum lycopersicum chromosome 2 clone C02HBa0104K03, complete sequence |
GenBank | AC232778 | 0.0 | Solanum lycopersicum chromosome 2 clone C02SLm0127N23, complete sequence |