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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g077390.1.1 |
Common Name | S |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WOX |
Protein Properties |
Length: 359aa MW: 40145.5 Da PI: 7.5684 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g077390.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 54.8 | 1.6e-17 | 49 | 109 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++ +eq+++Le+ F++ +p ++e++++ +kl ++ +++V++WFqNr+ + k+
Solyc02g077390.1.1 49 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAKLqeygQVGDANVFYWFQNRKSRSKH 109
89*****************99*************************************995 PP
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2 | Wus_type_Homeobox | 111.9 | 3.5e-36 | 48 | 111 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq
Solyc02g077390.1.1 48 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHKQ 111
689***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MASSNRHWPS MFKSKPCNSH HHQWQHDINS SIIQQRPPCN PEERSPEPKP RWNPRPEQIR 60 ILEAIFNSGM VNPPRDEIRK IRAKLQEYGQ VGDANVFYWF QNRKSRSKHK QRHLQAKAQQ 120 QHHNNNNNSS HQPIITSSSS SSDKSSPNSL TFSIGTSNVM DLLNSPTSSV NQQNYNEFLS 180 NEQPFFFTVQ PPPVVPTHDH SAGFCFQDSS TFTPHSSSSG LLLNEWMGGI STQAPNNSKK 240 DENDKINLQS QLMSYTVTST VSPLATTTIP TISHIQGVTV DPNDAGPTRS TVFINDVAFE 300 VGIGPFNVRE VFGEDAVLIH SSGEPLITNE WGITIQPLQH GAFYYLLRTS SIASTHHI*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ190663 | 0.0 | Solanum lycopersicum cultivar M82 COMPOUND INFLORESCENCE (S) mRNA, complete cds |