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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g071990.2.1 |
Common Name | LOC101250766 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
BES1 |
Protein Properties |
Length: 325aa MW: 34908.9 Da PI: 8.0569 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g071990.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 195.3 | 2.2e-60 | 2 | 142 | 1 | 147 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91
++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++ +++gs s+s +
Solyc02g071990.2.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYRKGCKPVTRIDIGGS-VSVS-S 90
5899************************************************************************66666554.4444.4 PP
DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvs 147
ss+q sp +sy++sp sss+psp+s+ + + ++ +sl+p+l++ls+ s
Solyc02g071990.2.1 91 SSYQ--------LSPGASYNPSPVSSSIPSPVSSHYVANVQNnsdpNSLIPWLKNLSSGS 142
5667........566666666666666666666555443333345599*******98754 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG 60 WIVEEDGTTY RKGCKPVTRI DIGGSVSVSS SSYQLSPGAS YNPSPVSSSI PSPVSSHYVA 120 NVQNNSDPNS LIPWLKNLSS GSSPSLSNFP HHLCIPGGSI SAPVTPPLSS PTASTPRMND 180 NWENPTANST WIQQHYPFLP SSTPPSPGRQ TPPDSGWLSG VQTPQDGPSS PTFSLVSSNP 240 FGFKEPLSNG GSRMWTPGQS GTCSPAVGPC MDQTADVPMS DAISAEFAFG SNMKGVVKPW 300 EGERIHEECI SDDLELTLGN SSTR*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC226521 | 0.0 | Solanum lycopersicum chromosome 2 clone C02SLm0096H01, complete sequence |