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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g062090.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NAC |
Protein Properties |
Length: 183aa MW: 20709.4 Da PI: 4.6336 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g062090.1.1 | genome | ITAG | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 23.3 | 1.8e-07 | 7 | 84 | 11 | 88 |
NAM 11 deelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgk 88
dee + +yL k v+g +e+ + i+ vd+y +P++L ++ +++++ + F++ +kk+ +gk+ nr + g Wk +
Solyc02g062090.1.1 7 DEEQLLRYLLKFVTGMLVEC-DQIRFVDLYGKeKPSQLFET--TTTDRHHVFTQLKKKKGNGKNFNRgiVGGGGSWKGIDN 84
777778***********999.88******97648****633..23457899****************73344889*97655 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MGMMNFDEEQ LLRYLLKFVT GMLVECDQIR FVDLYGKEKP SQLFETTTTD RHHVFTQLKK 60 KKGNGKNFNR GIVGGGGSWK GIDNDLGQIS AAANVIPNGN ITQVSLVTEE SKLRQGSVHQ 120 ETPPDYDIAT YYKQLDAHAV SVLETMVPYI PEPLQEDEVD SIPLFSEDFY IGYIDLWLKN 180 WQ*
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC246743 | 1e-154 | Solanum lycopersicum strain Heinz 1706 chromosome 2 clone hba-11o22 map 2, complete sequence |