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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g062060.1.1 |
Common Name | LOC101254272 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NAC |
Protein Properties |
Length: 207aa MW: 23932.1 Da PI: 6.9033 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g062060.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 39.4 | 1.9e-12 | 6 | 114 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkg 97
+de+l+ yL + v+g ++ + + i++v++y+ +P++L + +++++ y F++ +kk gk nr + g W+a g +++v++k++
Solyc02g062060.1.1 6 EDEQLI-GYLINFVTGMPVGC-DEIRTVELYSNkKPSQLFDT--TTTDHHYVFTELKKK---GKYFNRgiGGRGGSWRAYGASEDVVDKNR 89
599999.9**********999.77****9997659****633..234577999988776...5677774234599**************** PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
+++g k+ + f ++ + W+m+ey l
Solyc02g062060.1.1 90 SVIGFKRRFRFD--EE----NHIWIMKEYCL 114
***********7..22....458******86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MGTNIEDEQL IGYLINFVTG MPVGCDEIRT VELYSNKKPS QLFDTTTTDH HYVFTELKKK 60 GKYFNRGIGG RGGSWRAYGA SEDVVDKNRS VIGFKRRFRF DEENHIWIMK EYCLFDSKLK 120 DLRLRGQIRH EGFVVCSIMR KDTCSSQCQE NQDLGLIQSD DLKESTMTAV KQDECFVRQE 180 VVDEETLRNA YTRPLLDSMF RNTPKP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC246743 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 2 clone hba-11o22 map 2, complete sequence |