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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g061910.1.1 |
Common Name | LOC104646076 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NAC |
Protein Properties |
Length: 265aa MW: 29914.8 Da PI: 6.2889 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g061910.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 37.4 | 7.6e-12 | 21 | 115 | 26 | 128 |
NAM 26 kkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkya.tgkrknr..atksgyWkatgkdkevlskkgelvglkktLvfykgr 112
+ i+ vd+y +P+++ + a+ +e++ F++ +kk++ +gk+ nr + g Wk ++k+v++ k++++g kkt+ f +
Solyc02g061910.1.1 21 VS----VQIQFVDLYGNnKPSQIFDT--ATATEYHVFTRLKKKKTgNGKNFNRgiVGGGGSWKGIDNSKPVYDWKRSVIGSKKTFRFE--E 103
33....2378899996548*999633..346789989887666654899****74445899**************************7..2 PP
NAM 113 apkgektdWvmheyrl 128
+ + W+m+eyrl
Solyc02g061910.1.1 104 N----NHVWIMKEYRL 115
2....458******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MKINLTDEQL MLSLLKFVTG VSVQIQFVDL YGNNKPSQIF DTATATEYHV FTRLKKKKTG 60 NGKNFNRGIV GGGGSWKGID NSKPVYDWKR SVIGSKKTFR FEENNHVWIM KEYRLCDKAQ 120 NALIESGRIQ EEFVVCRITR SVNSSSSNFV PISSSQPQQT VKSFSPDLGQ ISAAANVIPN 180 GNITQVSLVT EESKLRQGSV HQETPPDYDI TTYYKQLDAY AVSVLETMVP YIPEPLQEDE 240 VDSIPLFSED FYIGYTDLWL KNWQ*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC246743 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 2 clone hba-11o22 map 2, complete sequence |