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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g061870.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NAC |
Protein Properties |
Length: 220aa MW: 25210.6 Da PI: 7.0733 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g061870.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 41.5 | 4.2e-13 | 6 | 114 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkg 97
+de+l+ yL + v+g ++ + + i+ v++y +P++L + +++++ yfF++ +k+ gk nr a + g W++ g+++ev++k++
Solyc02g061870.1.1 6 NDEQLI-GYLINFVTGVPVGC-NEIRIVELYGNkKPSQLFDT--TTTDHHYFFTELKKR---GKYFNRgiAGRGGSWRKYGTNEEVVDKNR 89
699999.9**********999.6699999886549****633..234577999888764...6677776466799**************** PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
+++g k+ + f + e+ W+m+ey l
Solyc02g061870.1.1 90 SVIGFKRRFRFE--E----ENHIWIMKEYCL 114
***********7..2....3458******86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MGTNINDEQL IGYLINFVTG VPVGCNEIRI VELYGNKKPS QLFDTTTTDH HYFFTELKKR 60 GKYFNRGIAG RGGSWRKYGT NEEVVDKNRS VIGFKRRFRF EEENHIWIMK EYCLFDSKLK 120 DLRLRGQIRH EGFVVCSIMR KGTCSSQCQV NQDLGLIQCD DLKESTMTAA KDDECSVRQE 180 VVHTRPLLDS MDGNIPGQVG LGSNEHQETP YSVTFYEFL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC246743 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 2 clone hba-11o22 map 2, complete sequence |