 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Solyc02g036430.1.1 |
| Common Name | LOC101257320 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
NAC |
| Protein Properties |
Length: 566aa MW: 64873.1 Da PI: 5.1193 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc02g036430.1.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 181.4 | 2.3e-56 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd
Solyc02g036430.1.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPdKsLLPSKDMEWYFFSPRDRKYPNGTRTNRATKAGYWKATGKD 95
79****************************.99**************96435566888********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
++v s + + +g+kktLv+y+grap+g++t Wvmheyrle
Solyc02g036430.1.1 96 RKVNS-QMRPIGMKKTLVYYRGRAPHGTRTGWVMHEYRLE 134
****9.999*****************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 566 aa
Download sequence Send
to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPDKSLLPSK 60
DMEWYFFSPR DRKYPNGTRT NRATKAGYWK ATGKDRKVNS QMRPIGMKKT LVYYRGRAPH 120
GTRTGWVMHE YRLEERECEV ANGLQDAYAL CRVFKKSLNV PKIGDHYGSD RSGCSINDQL 180
YTEGRGEDCD YGMMTTTTSS SSRLLHGSPL MNHAAPTPTN DDNKWMQYLS DEANYTFNNN 240
PSFATNGHFP YNHPSKVDIA LECARLQHRF ALPPLEVQDF PQVGYVMSQS NDVMYHQSTT 300
SQTDIVQEIL SVAQASHDLT NQEYSWDGNY NNINYGDDFS FLPHSHNNNH DLGNSFNFMD 360
QLKEDDDQNN SIPIADFDED FKSETMVERL RWVGMSQKDD KAFLEDYKTV PIENISGPHK 420
EEQDQLQGEA SGQQNNMNET EANNFSLGFG NDDNFLDDEE TDGFSSSPSF EVYEKIEVNQ 480
GMFIATRQVA NTFYHQVAPS KTVTIHRDMV TMHDFPIRKI TKSATFLDTF MAFSRKTLSR 540
VVMRVNTLVE LIAPLHTFWT ILENA*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 2e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC246741 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 2 clone slm-55o9 map 2, complete sequence |
