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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc02g032180.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NF-YB |
Protein Properties |
Length: 288aa MW: 31669.5 Da PI: 5.0201 |
Description |
NF-YB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc02g032180.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YB | 39.2 | 1.7e-12 | 152 | 199 | 2 | 51 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseas 51
+eqd+++P nv+rim+ + P + is+d k+t+ +c+sefi fvt e++
Solyc02g032180.1.1 152 QEQDQVIP--NVARIMHSTHPPHIMISDDVKQTMYHCISEFICFVTYETN 199
57888877..************************************9976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MEALDHFSKV TALMADLDKS NIFIAGVGEA VKQNIRLTTG FSVGTHPIKY LGLPLTSKNV 60 ANGTLLQSGN SCGKLLSKKH IPYKESFERE VYLYRQSEMD NGNHVGGSGN GGFHSYHRSP 120 QPTSVDPPSL DMEMSLELPA HLNQEVVEII IQEQDQVIPN VARIMHSTHP PHIMISDDVK 180 QTMYHCISEF ICFVTYETNA FEDDGGECRS HTRESLLKRP MVDTASSSNI TPYNLPPIFP 240 MAHDHFFFSP PMGNGDIQGD APNGSTSQCA VASMDSDVES PKEEDKE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC204082 | 9e-79 | Solanum lycopersicum cv. Heinz 1706, chromosome 5 BAC clone C05SLe0086I08, complete sequence |