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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc01g108930.2.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
B3 |
Protein Properties |
Length: 286aa MW: 32498.2 Da PI: 9.294 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc01g108930.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 53.6 | 4.1e-17 | 24 | 103 | 14 | 99 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
+ l++p +f+++ + +e++ + tl+ +sg +W+vkl + ++ +++kGWk+F k n+L+ g+ +vF++dg +f ++++f+k
Solyc01g108930.2.1 24 NELRIPAHFLRHVS--EESPDKATLKCLSGGTWNVKL--QCDEDGLLIQKGWKKFQKNNQLENGEYLVFRYDGALQF--TIRIFSK 103
4599******7776..447779***************..888888**************************997777..9999987 PP
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2 | B3 | 58.4 | 1.3e-18 | 180 | 272 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
f+k l+ +v ks+ l++p+ f e+ +g+ ++ +l++++g+ W+v++ + g + + +GWk+Fv++n+Lkeg ++vF+l++
Solyc01g108930.2.1 180 FVKCLKGYNVKKSCFLYVPRWFSEQLstSGN---KRAAVLRNSEGKGWKVNC--ITQNGYHAFCGGWKQFVSDNNLKEGQVCVFQLVN--A 263
7888988999*************98865444...4579**************..66666688999********************986..5 PP
E..EEEEE- CS
B3 90 felvvkvfr 98
el+v+vf+
Solyc01g108930.2.1 264 NELKVSVFN 272
556999886 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MENSLLKIDK RAIFYKVFCP SITNELRIPA HFLRHVSEES PDKATLKCLS GGTWNVKLQC 60 DEDGLLIQKG WKKFQKNNQL ENGEYLVFRY DGALQFTIRI FSKNGLERQV KSTNMVENQQ 120 ASIDGGSKRK RPEKFPKKTC ANGENETEDV CCVSLEHETR RKRAALVTEE DLLTPNIPQF 180 VKCLKGYNVK KSCFLYVPRW FSEQLSTSGN KRAAVLRNSE GKGWKVNCIT QNGYHAFCGG 240 WKQFVSDNNL KEGQVCVFQL VNANELKVSV FNDPSESLLK LAAQR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC238499 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-8l19 map 1, complete sequence |