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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc01g108300.2.1 |
Common Name | LOC101243935 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
G2-like |
Protein Properties |
Length: 406aa MW: 45059.3 Da PI: 8.1463 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc01g108300.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 104.8 | 4.9e-33 | 261 | 316 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
Solyc01g108300.2.1 261 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 316
79****************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MGSIPAELSL DCRPSFIPKS ITDFLRQLSL IRNVPDKLSQ IDDYITRLED EMRKIDAFKR 60 ELPLSVLLVK DAIVALREES MQYRKSRTEP VLEEFIPLKK SSREDTKAEI TKDKDSREKM 120 SWMSSVQLWN SESHCENTDE AINKQQSKSE LKDTQRSPEE GNSSVTEDPF QSCKTMNAAK 180 AFSVPFKGYS GFSVTAVRKD NKDELPGLSL HTPGITKLRE DTVTSGLNSK HSGSRGGLSS 240 VAGCQSNMRT GSLAQQQSSR KQRRCWSPEL HRRFVDALQQ LGGSQVATPK QIRELMQVDG 300 LTNDEVKSHL QKYRLHTRRI PNSQTQPANQ SGVALGNLWM SQGQYGESSK QSSSQSGSPQ 360 GPLHLAGSCG GTSTTVGDSM DEEDDVKSEN HSWKNHVHTS GKVDV*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 8e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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