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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc01g107170.2.1 |
Common Name | ZF2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
C2H2 |
Protein Properties |
Length: 311aa MW: 32928 Da PI: 7.5339 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc01g107170.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 12.4 | 0.00048 | 135 | 157 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C+k+F++ L H +H
Solyc01g107170.2.1 135 FRCSECPKVFTSYQALGGHKASH 157
89**********99999998877 PP
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2 | zf-C2H2 | 13.6 | 0.00019 | 195 | 217 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C k F++ L H r+H
Solyc01g107170.2.1 195 HVCSICQKAFPTGQALGGHKRRH 217
79*******************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MSIEALKSPM AAKLSPTVAE LPPLEEIDDD SHNLDSWAKG KRSKRPRIEN PPTRDQYLAL 60 CLLMLANDDG TGFGKGKGNG TGSIGVEQTE KKPAELKPVF IEEKTEQLLK PVVDKEKTEQ 120 LLKPVVVKEK TEQLFRCSEC PKVFTSYQAL GGHKASHRKI NVPATGDDDS NPSTSTSTSG 180 GGVNISALNP SGRSHVCSIC QKAFPTGQAL GGHKRRHYEG KLGGNNRYIG GGGEGGGVHS 240 GSVVTTSDGG SGNGGGGAST PIARDFDLNM PASPGWQLDL TIDCGGRTQH PIEQEVESPM 300 PAKKPRLFFE *
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Function -- GeneRIF ? help
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- SlZF2 both increased and reduced expression of a comparable number of genes involved in various physiological processes such as photosynthesis, polyamine biosynthesis, and hormone (notably ABA) biosynthesis/signaling.
[PMID: 24567191]
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