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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc01g090340.2.1 |
| Common Name | GAME9 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
ERF |
| Protein Properties |
Length: 220aa MW: 24464.4 Da PI: 5.1512 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc01g090340.2.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 46.1 | 1.2e-14 | 82 | 132 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr++ +g + AeIrdp + + +r +lg++ ++ +Aa a+++a+ k++g
Solyc01g090340.2.1 82 RFIGVRRRQ-WGTFSAEIRDP---NrRGARLWLGTYESPRDAALAYDQAAYKIRG 132
578***887.**********9...4334*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MSIVIDDDEI FSLPSLDELE SITHLLYDDD SDFFETLSPM SLDVTTLLPN IPTSNSIESP 60
VTPEETKEPS VACEDAPQDW RRFIGVRRRQ WGTFSAEIRD PNRRGARLWL GTYESPRDAA 120
LAYDQAAYKI RGTKVRLNFP DLIGSDVPMP PRVTARRRTR SRSRSPEPLT TSSSSSSSSS 180
SSSSSSSENG TKKRKIDLIN SIAKSKLLCG MDLQMLIQM*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots and at low levels in buds and leaves. Not expressed in cell culture. {ECO:0000269|PubMed:7756828}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Function -- GeneRIF ? help
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- GLYCOALKALOID METABOLISM 9 (GAME9) controls steroid glycoalkaloid biosynthesis and upstream mevalonate pathway genes.
[PMID: 26876023] - master transcriptional regulator of defense-related steroidal glycoalkaloids
[PMID: 29569783] - regulates tobacco quinolinate phosphoribosyl transferase(QPT) gene in tomato though it does not regulate tomato QPT gene
[PMID: 30478481]
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| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G44840.1 | 7e-30 | ethylene-responsive element binding factor 13 |
| Publications
? help Back to Top |
- Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
Theor. Appl. Genet., 2005. 112(1): p. 72-84
[PMID:16208505] - Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
Plant Cell Physiol., 2006. 47(4): p. 554-8
[PMID:16452120] - C
GAME9 regulates the biosynthesis of steroidal alkaloids and upstream isoprenoids in the plant mevalonate pathway.
Nat Commun, 2016. 7: p. 10654
[PMID:26876023] - Nakayasu M, et al.
JRE4 is a master transcriptional regulator of defense-related steroidal glycoalkaloids in tomato.
Plant J., 2018. 94(6): p. 975-990
[PMID:29569783] - Shoji T,Hashimoto T
Expression of a tobacco nicotine biosynthesis gene depends on the JRE4 transcription factor in heterogenous tomato.
J. Plant Res., 2019. 132(2): p. 173-180
[PMID:30478481]
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