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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc01g080050.2.1 |
| Common Name | LOC101246861 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
bHLH |
| Protein Properties |
Length: 196aa MW: 21871.6 Da PI: 8.8471 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc01g080050.2.1 | genome | ITAG | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 33.7 | 6.7e-11 | 2 | 49 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+h ++Er+RR+++N+ + Lr+l P + k+ + a+i ++e+Ik+L
Solyc01g080050.2.1 2 SHIAVERNRRRQMNENLKVLRSLTPCF---YIKRGDQASIIAGVIEFIKEL 49
89************************9...9******************99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 196 aa
Download sequence Send
to blast |
MSHIAVERNR RRQMNENLKV LRSLTPCFYI KRGDQASIIA GVIEFIKELH LVLQSLEAKK 60
RRKSLSPSPG PTTPRPLQLS PTPESSPFIT HNNNFKELGA CCNSPVADVE ARICGSNVML 120
RTISKRIPGQ IVKIINVLEK LSFEILHLNI STMQDTVLYS FVIKIGLECQ LSVEELALEV 180
QKSFTSSDVL CINEI*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Strongly expressed in meristemoids and at lower levels in guard mother cells (GMCs) and guard cells. {ECO:0000269|PubMed:17183265, ECO:0000269|PubMed:17183267}. |
| Uniprot | TISSUE SPECIFICITY: Leaf epidermis and flowers. {ECO:0000269|PubMed:12679534, ECO:0000269|PubMed:17183265}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Together with FMA and SPCH, regulates the stomata formation. Required for the differentiation of stomatal guard cells, by promoting successive asymmetric cell divisions and the formation of guard mother cells. Promotes the conversion of the leaf epidermis into stomata. {ECO:0000269|PubMed:17183265, ECO:0000269|PubMed:17183267}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By UV, flagellin, and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}. |
| Publications
? help Back to Top |
- Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
Theor. Appl. Genet., 2005. 112(1): p. 72-84
[PMID:16208505] - Casson S,Gray JE
Influence of environmental factors on stomatal development.
New Phytol., 2008. 178(1): p. 9-23
[PMID:18266617] - Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Balcerowicz M,Ranjan A,Rupprecht L,Fiene G,Hoecker U
Auxin represses stomatal development in dark-grown seedlings via Aux/IAA proteins.
Development, 2014. 141(16): p. 3165-76
[PMID:25063454] - de Marcos A, et al.
Transcriptional profiles of Arabidopsis stomataless mutants reveal developmental and physiological features of life in the absence of stomata.
Front Plant Sci, 2015. 6: p. 456
[PMID:26157447] - Mahoney AK, et al.
Functional analysis of the Arabidopsis thaliana MUTE promoter reveals a regulatory region sufficient for stomatal-lineage expression.
Planta, 2016. 243(4): p. 987-98
[PMID:26748914] - Klermund C, et al.
LLM-Domain B-GATA Transcription Factors Promote Stomatal Development Downstream of Light Signaling Pathways in Arabidopsis thaliana Hypocotyls.
Plant Cell, 2016. 28(3): p. 646-60
[PMID:26917680] - Fu ZW,Wang YL,Lu YT,Yuan TT
Nitric oxide is involved in stomatal development by modulating the expression of stomatal regulator genes in Arabidopsis.
Plant Sci., 2016. 252: p. 282-289
[PMID:27717464] - Qi X, et al.
Autocrine regulation of stomatal differentiation potential by EPF1 and ERECTA-LIKE1 ligand-receptor signaling.
Elife, 2018.
[PMID:28266915] - Raissig MT, et al.
Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata.
Science, 2017. 355(6330): p. 1215-1218
[PMID:28302860] - Lee JH,Jung JH,Park CM
Light Inhibits COP1-Mediated Degradation of ICE Transcription Factors to Induce Stomatal Development in Arabidopsis.
Plant Cell, 2017. 29(11): p. 2817-2830
[PMID:29070509] - Han SK, et al.
MUTE Directly Orchestrates Cell-State Switch and the Single Symmetric Division to Create Stomata.
Dev. Cell, 2018. 45(3): p. 303-315.e5
[PMID:29738710]
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