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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc01g014480.2.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
EIL |
Protein Properties |
Length: 676aa MW: 76072.6 Da PI: 6.4035 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc01g014480.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 417.3 | 1.7e-127 | 38 | 401 | 1 | 350 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91
eel++rmwkd+++lkrlker+k +++ a++++k++++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++
Solyc01g014480.2.1 38 EELERRMWKDRVKLKRLKERQKIA--AQQ-AAEKQKNKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNI 125
8*******************9964..455.599********************************************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS
EIN3 92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182
raWWkekv+fd+ngpaai+ky+a++ +++ s+ ++ + ++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWP+G+++ww
Solyc01g014480.2.1 126 RAWWKEKVKFDKNGPAAIAKYEAECHSKGEGISN--QNGNPQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVSPPWWPSGNDEWWV 214
*********************9988766655555..67999999*********************************************** PP
HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.....X CS
EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.....s 266
++gl+k q+ ppykkphdlkk++kv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l+vl++ee+ ++ + ss
Solyc01g014480.2.1 215 KMGLPKGQK-PPYKKPHDLKKMFKVGVLTAVIKHMSPDIAKIRRLVRQSKCLQDKMTAKESSIWLAVLSREESTIRLQTNDngSSsiseaP 304
*********.9**************************************************************997666666633566664 PP
XXX..XXXXXXXXXXXXXXXX.......XXXXXX.XXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXX......XX CS
EIN3 267 lrk..qspkvtlsceqkedve.......gkkeskikhvqavktta.................gfpvvrkrkkkpsesakvsskevsrtcqs 331
+r +++k +++++++dv+ +++++ +++ +r+++++ ++ + +++ s
Solyc01g014480.2.1 305 IRGhgDKKKSSVDSDSDYDVDdvnvsvsS----------RDERRNepldarpltdvpqshqsKEQGDGQRRRRKRARSNFQ---QTQLSPS 382
44434566666666677777743333321..........222222356667777677666443333334433333333333...3478888 PP
XXXXX.XXXXXXXXXXXXX CS
EIN3 332 sqfrgsetelifadknsis 350
+q ++ ++ ++d+n+ +
Solyc01g014480.2.1 383 EQQPYDVARNSLPDMNNAN 401
8888888999999998876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0071281 | Biological Process | cellular response to iron ion |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 676 aa
Download sequence Send
to blast |
MAVMDEIGID ISSDIEVDDI RCDNIAEKDV SDEEIDPEEL ERRMWKDRVK LKRLKERQKI 60 AAQQAAEKQK NKQTTDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG 120 SSDNIRAWWK EKVKFDKNGP AAIAKYEAEC HSKGEGISNQ NGNPQSVLQD LQDATLGSLL 180 SSLMQHCDPP QRKYPLEKGV SPPWWPSGND EWWVKMGLPK GQKPPYKKPH DLKKMFKVGV 240 LTAVIKHMSP DIAKIRRLVR QSKCLQDKMT AKESSIWLAV LSREESTIRL QTNDNGSSSI 300 SEAPIRGHGD KKKSSVDSDS DYDVDDVNVS VSSRDERRNE PLDARPLTDV PQSHQSKEQG 360 DGQRRRRKRA RSNFQQTQLS PSEQQPYDVA RNSLPDMNNA NAQFSGYIAN ESQPENNMMV 420 PRKSVERNSE GQSDLPLEES NLPMVPSANA VSTEETFVGN GPSIYPMLEN SEVVPYESRF 480 HLGTQDSVVQ RQLHDTQLQS RPQFSGMNNE PPNSIFHYGP PNNGLHNGSQ SSVLHHELQY 540 SGFTHGSQYS NLHKPTVYQY FTPSAEFGSA HEEQQSHLAF GQPQIKPQDS GVRSAVLHGD 600 RNGMSREDHH YGKDAFQNDH DRPAEMHFAS PITSGSPDYA RLSSPFNFEL DVPSPLDTGD 660 LELFLDEDVM TFFAS*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC246248 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-65c18 map 1, complete sequence |
Publications
? help Back to Top |
- Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments. Theor. Appl. Genet., 2005. 112(1): p. 72-84 [PMID:16208505] - Frerigmann H,Gigolashvili T
Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] - Zheng ZL,Zhang B,Leustek T
Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] - Panda SK,Sunkar R
Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] - Wawrzyńska A,Sirko A
EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]
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