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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc01g010240.2.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
YABBY |
| Protein Properties |
Length: 169aa MW: 18824.5 Da PI: 9.3643 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc01g010240.2.1 | genome | ITAG | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 58.7 | 2.5e-18 | 23 | 66 | 3 | 46 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsll 46
+++ se++Cyv+C+fCntilav +P + l+ +vtv+CGhC +l
Solyc01g010240.2.1 23 TMDPSEHLCYVRCSFCNTILAVGIPCKKLLDTVTVKCGHCGNLS 66
56899************************************984 PP
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| 2 | YABBY | 82.7 | 1e-25 | 98 | 157 | 100 | 159 |
YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159
+ s++++ ++p++p v++PPek+ r Psaynrf+k+eiqrika+ P+i hreafsaaakn
Solyc01g010240.2.1 98 QSSSSSEPSSPKAPFVVKPPEKKHRLPSAYNRFMKDEIQRIKAAHPQIPHREAFSAAAKN 157
336677788999999********************************************9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 169 aa
Download sequence Send
to blast |
MSSSSPNSSC LNLLESADHK INTMDPSEHL CYVRCSFCNT ILAVGIPCKK LLDTVTVKCG 60
HCGNLSFLSS RPPIQPQFFD HQPILQHQDF FNNFKKGQSS SSSEPSSPKA PFVVKPPEKK 120
HRLPSAYNRF MKDEIQRIKA AHPQIPHREA FSAAAKNVHS KYSKWDLG*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Detected during flower and leaf development. Expression in the flower meristem in the early stage of flower development. When carpel primordia begin to form, specific and uniform expression in carpel primordia. Expression in the central region of the leaf plastochron 1 (P1) primordia. Detected up to P4 stage, hardly detected in the P5 leaves. {ECO:0000269|PubMed:14729915}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Regulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}. |
