 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc01g008730.2.1 |
Common Name | LOC101260964 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
bZIP |
Protein Properties |
Length: 328aa MW: 36368.1 Da PI: 8.9236 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc01g008730.2.1 | genome | ITAG | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.1 | 1.1e-09 | 41 | 83 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
+ k rr+ +NReAAr+sR+RKka++++Le +L++ ++L
Solyc01g008730.2.1 41 DQKTLRRLSQNREAARKSRLRKKAYVQQLESSRMKLTQLEQEL 83
67899*************************9888888777655 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MADVSAMTDT STDVDTDDKN LRYLNSLTLG ATSDASDKTR DQKTLRRLSQ NREAARKSRL 60 RKKAYVQQLE SSRMKLTQLE QELQRARQQG IYVSSSGDQS QAMSGNGALA FDVEYARWLE 120 EHNRRTNELR GAVSSHAGDG ELRIIVDGIL AHYDELFKIK ADAAKADVFH ILSGMWKTPA 180 ERCFLWLGGF RSSELLKLLI NQLEPLTDQQ SLAINNLQQS SQLAEDALSQ GIESLQQSLA 240 ETLAGSLGPS GSSGNVANYM GQMAMAMGKL GTLEGFILQA DNLRQRMLQQ MHRILTTRQS 300 ARALLAIGDY FARLRALSSL WLARPRE*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC171735 | 1e-32 | Solanum lycopersicum chromosome 11 clone C11HBa0119D16, complete sequence |