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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc01g006650.1.1 |
Common Name | LOC101249950 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
EIL |
Protein Properties |
Length: 661aa MW: 73805.4 Da PI: 6.6342 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc01g006650.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 413.5 | 2.4e-126 | 38 | 396 | 2 | 348 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92
el++rmwkd+++lkrlke++k ++ a ++++ +++ ++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+g+sd++r
Solyc01g006650.1.1 38 ELERRMWKDRVKLKRLKEKQKLA--ARLA-AEKQDNKQVTDQATRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGSSDNIR 125
9****************999963..4555.8999999****************************************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHH CS
EIN3 93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwge 183
aWWkekv+fd+ng aai+ky+a++l+ +++ ++ ++ + ++ l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPtG+e ww++
Solyc01g006650.1.1 126 AWWKEKVKFDKNGLAAIAKYEAECLARGDGVGS--QNGNPQSVLEDLQDATLGSLLSSLMQHCDPPQRKYPLEKGISPPWWPTGDEGWWAK 214
**************************9988888..66999999************************************************ PP
HT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX......X CS
EIN3 184 lglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss......s 266
+gl+k q+ ppy+kphdlkk+wkv+vLtavikhmsp+i++ir+l r+sk+lqdkm+akes ++l+vl++ee+ +++ ++ ss
Solyc01g006650.1.1 215 MGLPKGQK-PPYRKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRLIRKSKSLQDKMTAKESSIWLAVLSREEATLQQAGSEngSSsveepvR 304
********.9*****************************************************************9999966335777554 PP
XXXXXXXXXXXXXXXXXXX..........XXXXXX.XXXXXXXXXX..........XXXXXXXXXXXXXXXXXXXXX......XXXXXXX. CS
EIN3 267 lrkqspkvtlsceqkedve..........gkkeskikhvqavktta..........gfpvvrkrkkkpsesakvsskevsrtcqssqfrgs 337
r +++k +s+++++dv+ ++e++ + + + ++k + + ++++ + s+ + ++ q sq+ g
Solyc01g006650.1.1 305 NRGEKKKPLVSSDSDYDVDitddgigsvsYRDERR----------NhvhplkaipqSHQSTEKGDGHHRRRKRARSNPTEKQIQPSQLHGD 385
4559999999*********7666666654222222..........23344444444445555556555666666666677889******** PP
XXXXXXXXXXX CS
EIN3 338 etelifadkns 348
e +++++d ns
Solyc01g006650.1.1 386 EHSNTLPDINS 396
******99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0042762 | Biological Process | regulation of sulfur metabolic process |
GO:0071281 | Biological Process | cellular response to iron ion |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 661 aa
Download sequence Send
to blast |
MAVMDEIGID VSSDIEIDDI KCDIAEKDVS DEEIEPKELE RRMWKDRVKL KRLKEKQKLA 60 ARLAAEKQDN KQVTDQATRK KMSRAQDGIL KYMLKLMEVC NARGFVYGII PDKGKPVSGS 120 SDNIRAWWKE KVKFDKNGLA AIAKYEAECL ARGDGVGSQN GNPQSVLEDL QDATLGSLLS 180 SLMQHCDPPQ RKYPLEKGIS PPWWPTGDEG WWAKMGLPKG QKPPYRKPHD LKKMWKVGVL 240 TAVIKHMSPD IAKIRRLIRK SKSLQDKMTA KESSIWLAVL SREEATLQQA GSENGSSSVE 300 EPVRNRGEKK KPLVSSDSDY DVDITDDGIG SVSYRDERRN HVHPLKAIPQ SHQSTEKGDG 360 HHRRRKRARS NPTEKQIQPS QLHGDEHSNT LPDINSSKML LAGRITSNSL QGNDKSETTN 420 SVENDLEIQS ELPLQDSNLS LVPSAHVVRK EDTYIGAGPS FYPMSQNSAV VPYESEMHLE 480 NQRSIVQHQF QDTQFHGLQK ISGINDGPQI SLSHYGPPNN GLQYGPPSSI AHTELQVSEF 540 AQGSQFSNFS QPPVYHSYSS PEFGATHAEP QSHLAHNELH VTPRHSGVGP SLHGSGNDIS 600 KVNHHDGKDM FQNNHDRHID MPFASPLGSP FDLGLDTESH FDNSDYDLDF DKELMSFFAS 660 *
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Publications
? help Back to Top |
- Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments. Theor. Appl. Genet., 2005. 112(1): p. 72-84 [PMID:16208505] - Frerigmann H,Gigolashvili T
Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] - Zheng ZL,Zhang B,Leustek T
Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] - Panda SK,Sunkar R
Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] - Wawrzyńska A,Sirko A
EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]
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