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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sof018704 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family |
bZIP |
Protein Properties |
Length: 153aa MW: 16944.9 Da PI: 7.8555 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-157a-Saccharum_officinarum-94273 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 49.7 | 8.2e-16 | 27 | 86 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+re+r+ +NRe+ArrsR+RK++ ++eL ++v+ L+aeN + + ++ + ++a++++e+
Sof018704 27 HRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQAENARVAARAADIASQYARVEQEN 86
58*****************************************************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 153 aa
Download sequence Send
to blast |
MSSSSLSPAG TGRTSGSDGD SAAADTHRRE KRRLSNRESA RRSRLRKQQH LDELVQEVAR 60 LQAENARVAA RAADIASQYA RVEQENTVLR ARAAELGDRL RSVNEVLRVV EEFSGVAMDI 120 QEEMPADDPL LRPWQLPYPA AAMPIGAAHM LHY
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 40 | 46 | RRSRLRK |
2 | 40 | 47 | RRSRLRKQ |
Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Sof.3613 | 0.0 | bud| callus| crown| inflorescence| leaf| meristem| root| seed| stem |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Roots and shoots of young plants, and basal portion of leaves. |
Functional Description ? help
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Source |
Description |
UniProt | May contribute to developmentally specific patterns of gene expression. Binds specifically to ocs elements which are transcriptional enhancer found in the promoters of several plant genes. OCSBF-1 is able to bind to a site within each half of the ocs element as well as to animal AP-1 and CREB sites. |