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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sof016767 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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| Family |
ERF |
| Protein Properties |
Length: 182aa MW: 19555.4 Da PI: 9.4908 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-157a-Saccharum_officinarum-81973 | PU_ref | plantGDB | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 61.7 | 1.6e-19 | 21 | 71 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+ +GVr ++ +gr++AeIrdp r +r++lg+f+t e+Aa+a++aa+++l+g+
Sof016767 21 RLRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTTEQAARAYDAAARRLRGP 71
679******.**********8...2.35**************************95 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 182 aa
Download sequence Send
to blast |
MAPKRSSEER AAAEEEREQP RLRGVRKRPW GRYAAEIRDP ARKARVWLGT FDTTEQAARA 60
YDAAARRLRG PRATTNYSYP DAVAVPAPTC TAPAASASCG TESSSSSSRD GDQPLAVTVQ 120
SLRPRLPSSL DLSLGLFPAI VGGQPYLFLD PXAGVCALAP IKREEERTWY SGSSSPVGAP 180
AX
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