PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sof015874
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
Family bZIP
Protein Properties Length: 193aa    MW: 20817.9 Da    PI: 9.7129
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Saccharum_officinarum-50932PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.71.6e-15132181453
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                ++r+rr++kNRe+A rsR+R++a++ eLe + ++L  eN++L+k+ +el+
  Sof015874 132 SRRQRRMIKNRESAARSRARRQAYTNELELELEQLRRENEMLIKRHQELN 181
                79*******************************************99997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-13124182No hitNo description
SMARTSM003383.7E-9129193IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.254131181IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-10133181No hitNo description
PfamPF001703.2E-13133181IPR004827Basic-leucine zipper domain
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MEEVWKDYMS LQPSLISITP AADAGGGGGA LYNHRHHQHL SPSGAGASHS PRSFSSPLQP  60
PTPPPPTTLS LSSTLEFTYL GGAGAGGGGG SSTSGDDSRD LMAFSFAPAD QYQQRYQTMK  120
QSSSSAAAAG DSRRQRRMIK NRESAARSRA RRQAYTNELE LELEQLRREN EMLIKRHQEL  180
NVRLATSSSA QGP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Sof.187771e-101inflorescence| leaf| meristem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002453116.23e-68bZIP transcription factor 27
TrEMBLC5XRG88e-67C5XRG8_SORBI; Uncharacterized protein
STRINGSb04g000300.11e-62(Sorghum bicolor)