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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sof015089 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
|
| Family |
GATA |
| Protein Properties |
Length: 202aa MW: 21505.8 Da PI: 8.3793 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-157a-Saccharum_officinarum-53300 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 56.1 | 4.9e-18 | 104 | 138 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+ C+ttkTplWR gp g+ +LCnaCG++yrkk++
Sof015089 104 CTECHTTKTPLWRGGPCGPMSLCNACGIRYRKKRR 138
********************************986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 202 aa
Download sequence Send
to blast |
TXSTFFPHSF APPPPPRRPA ARSAQQGCPP PRIDLPIRAG EWRRAPEGSA GDSARLETEE 60
EGSGSAVVDP PVLSPEMDSS VEKQGSGTLD PDERPPASGE TKACTECHTT KTPLWRGGPC 120
GPMSLCNACG IRYRKKRREA MGLDSSSKAG GGNEQQQQRK KKATAAAAAA AASKRERERE 180
KEADEVTVEL RAVGFGKVVP EP
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