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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sof006584 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family |
bZIP |
Protein Properties |
Length: 378aa MW: 40196.8 Da PI: 7.6334 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-157a-Saccharum_officinarum-13425 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 69.4 | 5.6e-22 | 244 | 306 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkre+rkq+NRe+ArrsR+RK+ae++eL++ v++L+aeN++L+ e+ +l++ ++kl+ e+
Sof006584 244 ERELKREKRKQSNRESARRSRLRKQAETQELATQVESLTAENTSLRTEIGRLTESSEKLRLEN 306
89*********************************************************9887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MAQDEAVAPQ KTGNTASPSK DYPTPCPYPD WSTMQAYYGP GVLPPTYFAP AIAPGHPPPY 60 MWGPQPIMPP PFGTPYAAVY PHGGAYPHPL VPMMSTPLSM EAAKSANSKE KTSNKKLKEI 120 DRTSVSAGSG NSKKNNASSE DYSAEDSSDV NDQKVNKTSR KRSSDDGPGA ETTTGANTEC 180 VLAPNHTLGN AAILPHHCFP APVIKPSPTN VANSRAIGTE ISPSPGVMVP AHTAVQSDLS 240 IKDERELKRE KRKQSNRESA RRSRLRKQAE TQELATQVES LTAENTSLRT EIGRLTESSE 300 KLRLENSALM VKLKDTAAPT PADKAATSSS SPCAAAENFL SMIDSAKAAG VSRHTEHGEP 360 NLRQLLDSSP AADVAAVS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 260 | 266 | RRSRLRK |
2 | 260 | 267 | RRSRLRKQ |