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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sof004279 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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| Family |
MYB_related |
| Protein Properties |
Length: 216aa MW: 24815.6 Da PI: 4.3848 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Sof#S17398911 | PU_unref | Unigene | View CDS |
| PUT-157a-Saccharum_officinarum-27467 | PU_ref | plantGDB | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 27.5 | 7.1e-09 | 65 | 107 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
rg+W++ + +l++++ +q+G++ ++ I + ++ +t+ q++ ++
Sof004279 65 RGKWSKSDTDLFYEGLRQFGSD-FAMIQQLFP-DKTRHQVRQKFK 107
89********************.*********.********9985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 216 aa
Download sequence Send
to blast |
XRARVNPKEA PSGPSSNTRS FELGDMDDLD YRDEEARFFD NDGTENHVQN ATKLNYQSYM 60
NKPARGKWSK SDTDLFYEGL RQFGSDFAMI QQLFPDKTRH QVRQKFKSEE KKNPLLVHDA 120
IIHRSGDNLY FKKVIKQLNI EDVVLPEINN TQKQDGASSE RGPGNENVLD DFNEEENSSN 180
WSNEEHGGQM ADVQEEHDLG KGGDDDDDLG DVFDWY
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