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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sof004111 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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| Family |
ERF |
| Protein Properties |
Length: 222aa MW: 23628.2 Da PI: 5.2857 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Sof#S17286525 | PU_unref | Unigene | View CDS |
| PUT-157a-Saccharum_officinarum-46714 | PU_ref | plantGDB | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 45.8 | 1.5e-14 | 138 | 177 | 2 | 44 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44
+y+GVr+++ +g+++AeIrdp +ng +r++lg ++tae+Aa
Sof004111 138 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGXYDTAEDAAV 177
8********.***********9987..**************96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MLLNPASEAL VLDTIRQHLL EEPAPAAEAR PADESFGSLV ADQWSGSLPF RTDDADDMVV 60
FGALQDAFAY GWLPDGSFAH VKPEPVRSPD SSHSYDGSCC FGGLLDPASP LTPSSEGGEV 120
AATPRREEAA AAVARGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGXYD TAEDAAVCYN 180
PAAYRIGGLR APLNFPFQLG SKIAVVGGFH VLGYLHSGGQ GK
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