 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sof002613 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
|
| Family |
G2-like |
| Protein Properties |
Length: 287aa MW: 31071.4 Da PI: 10.3742 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Sof#S17370988 | PU_unref | Unigene | View CDS |
| PUT-157a-Saccharum_officinarum-83725 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 105.4 | 3.2e-33 | 69 | 123 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt +LH+rFv+av+qLGG++kAtPk+i+++m+vkgLtl h+kSHLQkYRl
Sof002613 69 KPRLRWTADLHDRFVDAVAQLGGPDKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 123
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 287 aa
Download sequence Send
to blast |
XRFGGGTGRG ESKSAGELRA GKMFPSLIHH AGRARPDVAA AEDAPRSGGG LGLHGHGGGP 60
SVVLTADPKP RLRWTADLHD RFVDAVAQLG GPDKATPKAI MRTMGVKGLT LFHLKSHLQK 120
YRLGRQSGKE LTEQSKDASY LMEAQSGTTL SPRGSTPDVK ESQEVKEALR AQMEVQRRLH 180
EQVEVQKHMQ IRMEANQKYI DTILDKAFKI VSEQLSGFSI SDQDPPILNS AGVMLSPADH 240
LSSSVFSQLS VSSVSIHSPG GKGLPHIADS HVFSQRPPEQ LKRXSRX
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 5e-19 | 69 | 125 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-19 | 69 | 125 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-19 | 69 | 125 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-19 | 69 | 125 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Sof.5608 | 0.0 | bud| crown| inflorescence| meristem| stem |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
