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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sof002037 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family |
bZIP |
Protein Properties |
Length: 336aa MW: 35891.1 Da PI: 5.0184 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-157a-Saccharum_officinarum-32966 | PU_ref | plantGDB | View CDS |
PUT-157a-Saccharum_officinarum-728133731 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 46.9 | 5.9e-15 | 144 | 197 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
k+ rr+ +NRe+ArrsR+RK+a + Le v L++eN L k+l ++++++
Sof002037 144 AKKMRRMLSNRESARRSRKRKQAHLNDLESQVSRLTSENAYLLKRLADMTQKYK 197
699************************************999966655555554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
PIRSPPWSTR YEKGSDLAPG VAGGGSDDDD VVEVSCGGRG GGDPGSYAAV LKRKLDLYCA 60 AVAKSMEAKS QESSLGYPNS QASDTSQLIS QASFDGDIDG AGLVTNSNVI EDDDFQGKPA 120 NSGTSKELSD DDGDLEETID PSNAKKMRRM LSNRESARRS RKRKQAHLND LESQVSRLTS 180 ENAYLLKRLA DMTQKYKDAS LDNKNLTVDI ETMRRKVNIA EEAVRRLTGT TLMLSTAFDK 240 PASSTPLSSC ASDAASASVA IEDSMKHXLQ APLQNGQIKL DIPXAAIPLT SGVMGTKPAS 300 LQRVASLENL QKRIVGDSMH SETASTFSGX EALADR
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 157 | 163 | RRSRKRK |
2 | 157 | 164 | RRSRKRKQ |
3 | 159 | 164 | SRKRKQ |