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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sof000283 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family |
bZIP |
Protein Properties |
Length: 156aa MW: 16823.7 Da PI: 5.3797 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-157a-Saccharum_officinarum-476133729 | PU_unref | plantGDB | View CDS |
PUT-157a-Saccharum_officinarum-476133730 | PU_ref | plantGDB | View CDS |
PUT-157a-Saccharum_officinarum-51935 | PU_unref | plantGDB | View CDS |
PUT-157a-Saccharum_officinarum-51937 | PU_unref | plantGDB | View CDS |
PUT-157a-Saccharum_officinarum-51938 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 45.2 | 2e-14 | 39 | 98 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +r+ +NRe+ArrsR++K++++eeL +v+ L+aeN a ++++ + e ak++ e+
Sof000283 39 ERKRKRMLSNRESARRSRAKKQQRLEELVAEVARLQAENAAAQSRIAAFEREFAKVDGEN 98
46789999********************************************99998776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 156 aa
Download sequence Send
to blast |
EGEASDETMS SSRRSSSPDS NNTDVSGGGG SGGGIAADER KRKRMLSNRE SARRSRAKKQ 60 QRLEELVAEV ARLQAENAAA QSRIAAFERE FAKVDGENAV LRARHGELSG RLESLGGVLE 120 VLQMAGAAVD IPEMVTDDPM LRPWQPSFPP MQPIGF
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Sof.20393 | 0.0 | bud| callus| crown| inflorescence| leaf| meristem| root| seed| stem |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Roots and shoots of young plants, and basal portion of leaves. |
Functional Description ? help
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Source |
Description |
UniProt | May contribute to developmentally specific patterns of gene expression. Binds specifically to ocs elements which are transcriptional enhancer found in the promoters of several plant genes. OCSBF-1 is able to bind to a site within each half of the ocs element as well as to animal AP-1 and CREB sites. |