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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.010G200100.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ERF |
Protein Properties |
Length: 311aa MW: 32969.4 Da PI: 10.2041 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.010G200100.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 28.3 | 4.5e-09 | 42 | 89 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54
+y+GV+ ++ +r+ + I+ + + r+ +lg++ t+eeAa a +aa++ +
Sobic.010G200100.2.p 42 KYRGVH--HRENRYCSVIWNiY-T---RRLLWLGSYKTPEEAAYAWDAAARLTR 89
8****5..5579*******955.3...4*********************98665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MQGGGNIIVE FARRAAALAR FEWAARVAAR RQENLARRPV RKYRGVHHRE NRYCSVIWNI 60 YTRRLLWLGS YKTPEEAAYA WDAAARLTRG RHWAKTNFPE PAAWAWAWAW AVPAPEVVSP 120 AELVLALPMP ATAPARRRDD QAAAVAAQVS FDNWLLSSSA AAAEPLHRLQ GAPAVVLPDQ 180 QQLTAAALPP FTQFFHLSGP AAAAAANNGG GAVVNPSNPG AYVLTTQNVK MLPTNPATTA 240 LSGGAAPTHH RELPVSQASV SDLAVVEDNF TYDGTSTSAA PPPVPPLTPK DLLLQIGLPA 300 AGRGGPGGAQ *
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