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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.010G116200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 189aa MW: 22075.7 Da PI: 9.2157 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.010G116200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.4 | 4.8e-11 | 107 | 154 | 4 | 51 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
+r rr +NRe+ArrsR RK++++ +L e v L + N++L ++l++
Sobic.010G116200.1.p 107 ERRRRRTVSNRESARRSRVRKRKQLTQLWEQVVFLRGDNRDLLDRLNR 154
57999**************************************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MHPSEVASVF LPYLPPAATA SICFGIVPHY HTPADDDLHR LLFPCNDDSD LLTLPYTVAS 60 FEYAGGQPLL EHHHHHHHHH HHAVNDKDEG GDDRRLLQHR RQLLAEERRR RRTVSNRESA 120 RRSRVRKRKQ LTQLWEQVVF LRGDNRDLLD RLNRAIRDAD HVLRDNARLS DERAELQRRL 180 HELAGARR*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 107 | 112 | RRRRRT |
2 | 109 | 128 | RRRTVSNRESARRSRVRKRK |
3 | 120 | 126 | RRSRVRK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728263 | 4e-75 | KJ728263.1 Zea mays clone pUT6540 bZIP transcription factor (bZIP59) gene, partial cds. |