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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.009G178800.1.p |
Common Name | Sb09g023920, SORBIDRAFT_09g023920 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 325aa MW: 35038.1 Da PI: 6.3178 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.009G178800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 50.3 | 5e-16 | 254 | 297 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
+r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+
Sobic.009G178800.1.p 254 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ 297
79***************************************975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MSSQTGGGRG SDAGSVQRGQ MQSLARQGSL YNLTLDEVQS HLGEPLLSMN FDELLKSVFP 60 DGVDPDGAVS GKPDPTSSLQ RQGSIMMPLQ LSKKTVDEVW KGIQGGPETS AAVDGRQRRE 120 RQPTLGEMTL EDFLVKAGVV TEGHMKDSAD LQSNVDTVGS SVVVAGASSL NPGAQWLQQY 180 QQQALGSQQP SLAGSYMASQ LHPQPLSIAT GAIMDSIYSD GQITSPSFGA LSDPQTPGRK 240 RGALGEVVDK VVERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSRLEEE NERLKKQQEL 300 DEILSSAPPP EPKYQLRRTG SAAF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT061345 | 0.0 | BT061345.1 Zea mays full-length cDNA clone ZM_BFb0137L05 mRNA, complete cds. |
GenBank | EU966389 | 0.0 | EU966389.1 Zea mays clone 294076 bZIP transcription factor mRNA, complete cds. |