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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.009G151600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ERF |
Protein Properties |
Length: 280aa MW: 28555 Da PI: 7.8934 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.009G151600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 67 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g
Sobic.009G151600.1.p 67 RFRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 116
69*******.**********7.....337************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MHMHGVRGSQ RKGQQRDADD AADALYIPSH GSPYGGGEQG GAAAMEDGHH YSPTAAAAGG 60 GGGGERRFRG VRQRPWGKWA AEIRDPHKAA RVWLGTFETA EAAARAYDEA ALRFRGSRAK 120 LNFPEDARLT TPSTTAVATA AAPAAAGSST TTTMAAAAST GGYYYPATAS AAAVSAADYL 180 QYQMLLQGAG SSSHGGYPLY YDYGGGGGAM SSSSGSYSFP ASTVTVASVP SSASSAPSYG 240 EAAGQWTAWP PESAWSYPAT TGSSWSGSSQ YPPSTRPPQ*
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