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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.009G141500.1.p |
Common Name | Sb09g020690, SORBIDRAFT_09g020690 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ERF |
Protein Properties |
Length: 219aa MW: 21803.1 Da PI: 9.5609 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.009G141500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 48.8 | 1.7e-15 | 26 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr++ +g+Wv+eIr+p + r r +lg++ +e Aa a++aa+ l+g
Sobic.009G141500.1.p 26 CRYRGVRRRA-WGKWVSEIRVPGT---RERLWLGSYAAPEAAAVAHDAAACLLRG 76
78*****777.**********943...5**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MSRAASGGGA GTGRGGGGGA ERAHRCRYRG VRRRAWGKWV SEIRVPGTRE RLWLGSYAAP 60 EAAAVAHDAA ACLLRGGGGR AAGQAHLNFP DRAACYIVYG GSHGHGPPLS PRSVQRVASD 120 AGMAADAQIV DARAAAAALA APTTRVQPAA FAGIGAAQGG AQGAACAPPP YSDGASSSSS 180 STYWSTPSAS ASRTSSSTGS EQPLVFGDIS VDDIEILV*
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