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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.009G068900.1.p |
Common Name | Sb09g005700, SORBIDRAFT_09g005700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 207aa MW: 22091.3 Da PI: 7.5454 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.009G068900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97 | 1.3e-30 | 109 | 167 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYG+K vk+s++pr+YYrC+s+gC vkk+ver+++dp++v++tY g Hnh
Sobic.009G068900.1.p 109 LDDGFKWRKYGKKAVKNSPNPRNYYRCSSEGCGVKKRVERDRDDPRYVITTYDGVHNHA 167
59********************************************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0050832 | Biological Process | defense response to fungus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MQMAASLGLN PEALFASYSS AYSSSSPFVS DYAASFPAAV DSATAFSAEL DDLHHFDYSP 60 APIFTAVGAG AGGDRNEKMM MWCEGGGDEK RLRSSGRIGF RTRSEVEILD DGFKWRKYGK 120 KAVKNSPNPR NYYRCSSEGC GVKKRVERDR DDPRYVITTY DGVHNHASPG AAAIIQYGGG 180 GGNSGFYSPP HSGSPSAASY SGSFVF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT064457 | 0.0 | BT064457.1 Zea mays full-length cDNA clone ZM_BFc0171E09 mRNA, complete cds. |
GenBank | HQ858772 | 0.0 | HQ858772.1 Zea mays clone UT1758 WRKY transcription factor mRNA, partial cds. |