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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sobic.008G147101.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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| Family |
G2-like |
| Protein Properties |
Length: 408aa MW: 43095.5 Da PI: 7.9252 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sobic.008G147101.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.1 | 7.1e-32 | 246 | 301 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv a+++LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
Sobic.008G147101.1.p 246 KARRCWSPELHRRFVAALQRLGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 301
68****************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MMARKEDHQQ QQQQLRALAA RAVTDSLRAA ASRCSAADRA ARFRDCVRSL EAEKAKMEVF 60
RRELPISVHL VADVIQWLKD ELAQAQHRRH PPPPPPSDLF APATTEAAAA PAPPPQTQAQ 120
AQDGAAVKAD DAEADANDKR SWMSSAQLWS CGSHDDSTAN TNGVAAAAHS KVSTAFMPTL 180
ASPPTLARSP VDAACKLAGA TPVPDLSLSP PPSSAAAAPS ATSSAVTDAD RAQRQHQQAQ 240
AQQQRKARRC WSPELHRRFV AALQRLGGAQ VATPKQIREL MKVDGLTNDE VKSHLQKYRL 300
HTRRASSDVG GGDHLAAAAV GGLWSSSGAA EQQYATSQHS TSQSQSGSPQ GPLQLTTVSS 360
RAMSATAGDS CDGDGDEAEG GGRSESYGWE MQQQQQQQHG TKASSSS*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-13 | 246 | 299 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-13 | 246 | 299 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-13 | 246 | 299 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-13 | 246 | 299 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-13 | 246 | 299 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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